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scratch assay velocity evolution (save) profiler  (MathWorks Inc)


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    Structured Review

    MathWorks Inc scratch assay velocity evolution (save) profiler
    a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with <t>SAVE</t> <t>Profiler.</t> g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).
    Scratch Assay Velocity Evolution (Save) Profiler, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/scratch assay velocity evolution (save) profiler/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    scratch assay velocity evolution (save) profiler - by Bioz Stars, 2026-03
    90/100 stars

    Images

    1) Product Images from "Dynamic full-field optical coherence tomography allows live imaging of retinal pigment epithelium stress model"

    Article Title: Dynamic full-field optical coherence tomography allows live imaging of retinal pigment epithelium stress model

    Journal: Communications Biology

    doi: 10.1038/s42003-022-03479-6

    a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).
    Figure Legend Snippet: a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).

    Techniques Used: Wound Healing Assay, Cell Culture, Imaging

    a Beginning and end of the imaging of a scratch assay on ppRPE cell culture. b , c Evolution of scratch width and wound closure calculated with our programme and d optical flow calculations. e Beginning and end of the imaging of a scratch assay on hiRPE cell culture. f , g Evolution of the scratch width and wound closure, calculated with the SAVE profiler and ( h ) optical flow calculations. (scale-bar: 50 μm) (Statistics: see Supplementary Table ).
    Figure Legend Snippet: a Beginning and end of the imaging of a scratch assay on ppRPE cell culture. b , c Evolution of scratch width and wound closure calculated with our programme and d optical flow calculations. e Beginning and end of the imaging of a scratch assay on hiRPE cell culture. f , g Evolution of the scratch width and wound closure, calculated with the SAVE profiler and ( h ) optical flow calculations. (scale-bar: 50 μm) (Statistics: see Supplementary Table ).

    Techniques Used: Imaging, Wound Healing Assay, Cell Culture



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    MathWorks Inc scratch assay velocity evolution (save) profiler
    a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with <t>SAVE</t> <t>Profiler.</t> g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).
    Scratch Assay Velocity Evolution (Save) Profiler, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/scratch assay velocity evolution (save) profiler/product/MathWorks Inc
    Average 90 stars, based on 1 article reviews
    scratch assay velocity evolution (save) profiler - by Bioz Stars, 2026-03
    90/100 stars
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    a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).

    Journal: Communications Biology

    Article Title: Dynamic full-field optical coherence tomography allows live imaging of retinal pigment epithelium stress model

    doi: 10.1038/s42003-022-03479-6

    Figure Lengend Snippet: a Drawing of our custom-built Full-Field OCT system. BS beam-splitter, HPF high-pass filter, PZT piezo-electric translation, TS translation stage (for the sample). b Schematic of the RPE cell layer before and after the scratch assay (from left to right). c Recombined three channels of HSV computation and the three different channels in lower left. The colorbar represents the frequency variations of the sample (Hue channel). d – g Results of the analysis of a closing scratch assay on a primary porcine RPE cell culture (ppRPE). d Beginning and end (i.e., closing) of the imaging of the scratch assay. The dotted white square corresponds to the area used for calculations. e , f Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. g Optical flow calculations showing velocity and motion direction. h – k Results of the analysis of a closing scratch assay on a hiRPE cell culture. h Beginning and end (i.e., closing) of the imaging of the scratch assay. i , j Plots of the evolution of scratch width and wound closure over the acquisition, calculated with SAVE Profiler. k Optical flow calculations. (Statistics: see Supplementary Table (scale-bar: 50 μm).

    Article Snippet: For this purpose, custom software was developed in Matlab, which we name the scratch assay velocity evolution (SAVE) profiler .

    Techniques: Wound Healing Assay, Cell Culture, Imaging

    a Beginning and end of the imaging of a scratch assay on ppRPE cell culture. b , c Evolution of scratch width and wound closure calculated with our programme and d optical flow calculations. e Beginning and end of the imaging of a scratch assay on hiRPE cell culture. f , g Evolution of the scratch width and wound closure, calculated with the SAVE profiler and ( h ) optical flow calculations. (scale-bar: 50 μm) (Statistics: see Supplementary Table ).

    Journal: Communications Biology

    Article Title: Dynamic full-field optical coherence tomography allows live imaging of retinal pigment epithelium stress model

    doi: 10.1038/s42003-022-03479-6

    Figure Lengend Snippet: a Beginning and end of the imaging of a scratch assay on ppRPE cell culture. b , c Evolution of scratch width and wound closure calculated with our programme and d optical flow calculations. e Beginning and end of the imaging of a scratch assay on hiRPE cell culture. f , g Evolution of the scratch width and wound closure, calculated with the SAVE profiler and ( h ) optical flow calculations. (scale-bar: 50 μm) (Statistics: see Supplementary Table ).

    Article Snippet: For this purpose, custom software was developed in Matlab, which we name the scratch assay velocity evolution (SAVE) profiler .

    Techniques: Imaging, Wound Healing Assay, Cell Culture